Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm27957-201ENSMUST00000184054 127 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm27972-201ENSMUST00000184720 137 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm44373-201ENSMUST00000196112 169 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm18644-201ENSMUST00000211458 815 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm24917-201ENSMUST00000083935 104 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm43523-201ENSMUST00000197397 2878 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 AC154630.1-201ENSMUST00000215334 2440 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm9836-201ENSMUST00000117132 216 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm23068-201ENSMUST00000158239 293 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm18199-201ENSMUST00000173820 835 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm18191-201ENSMUST00000174624 824 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm22621-201ENSMUST00000179678 74 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm27152-201ENSMUST00000183828 99 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm43144-201ENSMUST00000198256 485 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm5990-201ENSMUST00000203126 746 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm5324-201ENSMUST00000208115 476 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm45387-201ENSMUST00000209792 632 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm33601-201ENSMUST00000210001 961 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 AC154755.1-201ENSMUST00000225244 537 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 AC109172.2-201ENSMUST00000228792 381 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Gm14935-201ENSMUST00000121528 1708 ntBASIC11.72□□□□□ -0.53
Trim41Q5NCC3 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 AC129308.2-203ENSMUST00000224109 2385 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm43029-201ENSMUST00000201829 1535 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm44750-201ENSMUST00000206185 2223 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm13439-201ENSMUST00000117541 409 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm11943-201ENSMUST00000119473 327 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm9085-201ENSMUST00000119994 1072 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm3810-201ENSMUST00000122413 476 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm8648-201ENSMUST00000122457 221 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm25294-201ENSMUST00000122791 104 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm15534-201ENSMUST00000137642 562 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm9597-201ENSMUST00000171913 602 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm20691-201ENSMUST00000176889 333 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm23141-201ENSMUST00000178682 94 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm36935-201ENSMUST00000192526 292 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm7825-201ENSMUST00000204046 416 ntBASIC11.71□□□□□ -0.53
Trim41Q5NCC3 Gm44852-201ENSMUST00000207950 369 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms