Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm23593-201ENSMUST00000104309 120 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Mir5110-201ENSMUST00000175537 87 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm29201-201ENSMUST00000189120 431 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm37882-201ENSMUST00000195254 196 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm9317-201ENSMUST00000197055 862 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm33952-201ENSMUST00000197795 408 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm43116-201ENSMUST00000199789 195 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm45215-201ENSMUST00000206407 395 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm23927-201ENSMUST00000082466 215 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upf3bQ3ULL6 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm24350-201ENSMUST00000104163 133 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm24235-201ENSMUST00000104319 129 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm8595-201ENSMUST00000118250 630 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm13077-201ENSMUST00000121941 484 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm12650-201ENSMUST00000121966 258 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Mir1963-201ENSMUST00000158594 59 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm23207-201ENSMUST00000158665 102 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm7609-204ENSMUST00000161424 461 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm23162-201ENSMUST00000175081 121 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Mir7653-201ENSMUST00000184358 61 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm44281-201ENSMUST00000203090 166 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm44683-201ENSMUST00000209088 484 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm3800-201ENSMUST00000221086 554 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Upf3bQ3ULL6 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Upf3bQ3ULL6 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms