Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm12245-201ENSMUST00000117266 357 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm15531-201ENSMUST00000118062 252 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm12303-201ENSMUST00000119506 673 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm11804-201ENSMUST00000121663 468 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm21990-201ENSMUST00000124692 383 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm27355-201ENSMUST00000185045 128 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm28567-201ENSMUST00000190270 693 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm37044-201ENSMUST00000193531 693 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm37681-201ENSMUST00000193880 727 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm37659-201ENSMUST00000194574 111 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm38369-201ENSMUST00000195101 693 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm42452-201ENSMUST00000199749 617 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm17999-201ENSMUST00000211568 542 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trafd1Q3UDK1 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm14560-201ENSMUST00000118672 375 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm22895-201ENSMUST00000157508 308 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm24236-201ENSMUST00000157794 134 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Scarna6-201ENSMUST00000158656 265 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm28017-201ENSMUST00000183434 126 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm2325-201ENSMUST00000186637 581 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm6137-201ENSMUST00000187552 578 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm18969-201ENSMUST00000189423 730 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm45700-201ENSMUST00000205866 347 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm3257-201ENSMUST00000207217 675 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm45343-201ENSMUST00000210452 828 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Snord59a-201ENSMUST00000082844 74 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.26□□□□□ -1.57
Trafd1Q3UDK1 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trafd1Q3UDK1 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 206 ms