Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox3P53784 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox3P53784 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.21□□□□□ -1.58
Sox3P53784 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox3P53784 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.2□□□□□ -1.58
Sox3P53784 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Gm24125-201ENSMUST00000104105 137 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Gm22657-201ENSMUST00000104197 132 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sox3P53784 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Gm27762-201ENSMUST00000183417 109 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Gm42720-201ENSMUST00000196813 300 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Gm43078-201ENSMUST00000197222 168 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Gm33952-201ENSMUST00000197795 408 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Gm4874-201ENSMUST00000203589 691 ntBASIC5.2□□□□□ -1.58
Sox3P53784 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sox3P53784 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Sox3P53784 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sox3P53784 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.2□□□□□ -1.58
Sox3P53784 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Sox3P53784 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.2□□□□□ -1.58
Sox3P53784 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox3P53784 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 Mir546-201ENSMUST00000102105 121 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox3P53784 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Sox3P53784 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 Gm11561-201ENSMUST00000117429 417 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm13491-201ENSMUST00000118267 235 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm24628-201ENSMUST00000122761 289 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.19□□□□□ -1.58
Sox3P53784 Gm11507-201ENSMUST00000156462 412 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm23327-201ENSMUST00000157420 78 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Mir1947-201ENSMUST00000158235 85 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm7609-204ENSMUST00000161424 461 ntBASIC5.19□□□□□ -1.58
Sox3P53784 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.19□□□□□ -1.58
Sox3P53784 Gm28066-201ENSMUST00000188657 472 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm37719-201ENSMUST00000194615 292 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Gm34224-201ENSMUST00000204606 364 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox3P53784 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Gm19174-201ENSMUST00000216944 956 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox3P53784 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox3P53784 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox3P53784 Snord15b-201ENSMUST00000083032 145 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox3P53784 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.19□□□□□ -1.58
Sox3P53784 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Sox3P53784 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox3P53784 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox3P53784 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.18□□□□□ -1.58
Sox3P53784 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox3P53784 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms