Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox1P53783 Gm11197-201ENSMUST00000145158 839 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm25722-201ENSMUST00000157498 279 ntBASIC6.67□□□□□ -1.34
Sox1P53783 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm27820-201ENSMUST00000183628 175 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm28628-201ENSMUST00000187006 264 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm42958-201ENSMUST00000197595 318 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm44265-201ENSMUST00000203631 465 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm5001-201ENSMUST00000204361 331 ntBASIC6.67□□□□□ -1.34
Sox1P53783 AC109212.1-201ENSMUST00000215561 427 ntBASIC6.67□□□□□ -1.34
Sox1P53783 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm18704-201ENSMUST00000219736 446 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox1P53783 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox1P53783 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.67□□□□□ -1.34
Sox1P53783 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox1P53783 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox1P53783 Gm5185-201ENSMUST00000080271 619 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox1P53783 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox1P53783 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.67□□□□□ -1.34
Sox1P53783 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox1P53783 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox1P53783 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox1P53783 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Sox1P53783 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm44288-201ENSMUST00000205061 2795 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm3665-201ENSMUST00000177214 2461 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Sox1P53783 Mir465c-2-201ENSMUST00000104757 81 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm13087-201ENSMUST00000118298 256 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm13493-201ENSMUST00000120318 493 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm13162-201ENSMUST00000121481 454 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm25013-201ENSMUST00000158402 128 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm17217-201ENSMUST00000166613 469 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm8256-201ENSMUST00000169178 453 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm27853-201ENSMUST00000184176 250 ntBASIC6.66□□□□□ -1.34
Sox1P53783 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox1P53783 Gm37784-201ENSMUST00000193233 189 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm36953-201ENSMUST00000195295 268 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm9238-201ENSMUST00000196181 329 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm44857-201ENSMUST00000208331 196 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm18781-201ENSMUST00000211252 924 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm45724-201ENSMUST00000213031 420 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm21041-201ENSMUST00000214829 823 ntBASIC6.66□□□□□ -1.34
Sox1P53783 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Gm9088-201ENSMUST00000220237 508 ntBASIC6.66□□□□□ -1.34
Sox1P53783 AC141642.1-201ENSMUST00000220598 229 ntBASIC6.66□□□□□ -1.34
Sox1P53783 AC116589.1-201ENSMUST00000220634 327 ntBASIC6.66□□□□□ -1.34
Sox1P53783 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.66□□□□□ -1.34
Sox1P53783 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Sox1P53783 Gm23097-201ENSMUST00000083448 105 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Mir143-201ENSMUST00000083511 63 ntBASIC6.66□□□□□ -1.34
Sox1P53783 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms