Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Shmt1P50431 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm15125-201ENSMUST00000116185 800 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm15073-201ENSMUST00000117432 634 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm15233-201ENSMUST00000118747 400 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm13245-201ENSMUST00000119646 260 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm8545-201ENSMUST00000120692 801 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm15077-201ENSMUST00000122344 362 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm15335-201ENSMUST00000122442 411 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm24840-201ENSMUST00000122603 147 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Mir1945-201ENSMUST00000157919 78 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Mir3095-201ENSMUST00000175552 87 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm20770-201ENSMUST00000193474 694 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Shmt1P50431 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Shmt1P50431 CT025526.1-201ENSMUST00000217327 267 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm7042-201ENSMUST00000223027 384 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Shmt1P50431 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.14□□□□□ -1.43
Shmt1P50431 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Shmt1P50431 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Shmt1P50431 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Shmt1P50431 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Shmt1P50431 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Shmt1P50431 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Shmt1P50431 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Shmt1P50431 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm14335-201ENSMUST00000119165 810 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm12482-201ENSMUST00000120435 630 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm24767-201ENSMUST00000158509 95 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.13□□□□□ -1.43
Shmt1P50431 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Gm8023-201ENSMUST00000195298 903 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.13□□□□□ -1.43
Shmt1P50431 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC6.13□□□□□ -1.43
Shmt1P50431 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.13□□□□□ -1.43
Shmt1P50431 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Shmt1P50431 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.13□□□□□ -1.43
Shmt1P50431 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm17820-201ENSMUST00000220213 1068 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Gm6056-201ENSMUST00000221253 488 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.13□□□□□ -1.43
Shmt1P50431 Gm9269-201ENSMUST00000221661 578 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Shmt1P50431 AC166830.1-201ENSMUST00000224201 533 ntBASIC6.13□□□□□ -1.43
Shmt1P50431 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Shmt1P50431 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms