Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HttP42859 Gm27773-201ENSMUST00000184087 78 ntBASIC5.34□□□□□ -1.55
HttP42859 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.34□□□□□ -1.55
HttP42859 Gm38221-201ENSMUST00000195146 365 ntBASIC5.34□□□□□ -1.55
HttP42859 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.34□□□□□ -1.55
HttP42859 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 Gm25260-201ENSMUST00000083053 134 ntBASIC5.34□□□□□ -1.55
HttP42859 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HttP42859 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.34□□□□□ -1.55
HttP42859 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.34□□□□□ -1.55
HttP42859 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.34□□□□□ -1.55
HttP42859 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.34□□□□□ -1.55
HttP42859 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
HttP42859 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HttP42859 Gm43099-201ENSMUST00000198943 5241 ntBASIC5.34□□□□□ -1.56
HttP42859 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HttP42859 Gm24520-201ENSMUST00000179510 110 ntBASIC5.34□□□□□ -1.56
HttP42859 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC5.34□□□□□ -1.56
HttP42859 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HttP42859 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.56
HttP42859 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HttP42859 Gm43968-201ENSMUST00000203388 389 ntBASIC5.34□□□□□ -1.56
HttP42859 Gm7822-201ENSMUST00000222433 581 ntBASIC5.34□□□□□ -1.56
HttP42859 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HttP42859 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
HttP42859 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.34□□□□□ -1.56
HttP42859 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HttP42859 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HttP42859 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HttP42859 Gm3931-201ENSMUST00000119038 455 ntBASIC5.33□□□□□ -1.56
HttP42859 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.33□□□□□ -1.56
HttP42859 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HttP42859 Mir713-201ENSMUST00000178651 108 ntBASIC5.33□□□□□ -1.56
HttP42859 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Gm4734-201ENSMUST00000200117 777 ntBASIC5.33□□□□□ -1.56
HttP42859 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.33□□□□□ -1.56
HttP42859 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HttP42859 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HttP42859 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HttP42859 AC156645.1-201ENSMUST00000223066 5194 ntBASIC5.33□□□□□ -1.56
HttP42859 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.33□□□□□ -1.56
HttP42859 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
HttP42859 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Gm11698-201ENSMUST00000117948 455 ntBASIC5.33□□□□□ -1.56
HttP42859 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.33□□□□□ -1.56
HttP42859 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HttP42859 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HttP42859 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HttP42859 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC5.32□□□□□ -1.56
HttP42859 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HttP42859 Gm22269-201ENSMUST00000104002 130 ntBASIC5.32□□□□□ -1.56
HttP42859 Mir7014-201ENSMUST00000183853 63 ntBASIC5.32□□□□□ -1.56
HttP42859 Gm28957-201ENSMUST00000190174 373 ntBASIC5.32□□□□□ -1.56
HttP42859 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.32□□□□□ -1.56
HttP42859 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.32□□□□□ -1.56
HttP42859 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.32□□□□□ -1.56
HttP42859 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
HttP42859 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HttP42859 Gm23865-201ENSMUST00000157723 97 ntBASIC5.32□□□□□ -1.56
HttP42859 Gm27688-201ENSMUST00000183634 91 ntBASIC5.32□□□□□ -1.56
HttP42859 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.32□□□□□ -1.56
HttP42859 Mir484-201ENSMUST00000093566 67 ntBASIC5.32□□□□□ -1.56
HttP42859 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HttP42859 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HttP42859 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HttP42859 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HttP42859 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC5.32□□□□□ -1.56
HttP42859 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.32□□□□□ -1.56
HttP42859 Gm13469-201ENSMUST00000118231 350 ntBASIC5.32□□□□□ -1.56
HttP42859 Gm13593-201ENSMUST00000121329 692 ntBASIC5.32□□□□□ -1.56
HttP42859 Gm11385-201ENSMUST00000121513 570 ntBASIC5.32□□□□□ -1.56
HttP42859 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.32□□□□□ -1.56
HttP42859 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Gm44648-201ENSMUST00000208267 329 ntBASIC5.32□□□□□ -1.56
HttP42859 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HttP42859 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.31□□□□□ -1.56
HttP42859 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms