Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Sox6P40645 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm44894-201ENSMUST00000205280 2174 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm18852-201ENSMUST00000184149 3593 ntBASIC5□□□□□ -1.61
Sox6P40645 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm14335-201ENSMUST00000119165 810 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm15044-201ENSMUST00000120703 598 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm25291-201ENSMUST00000122795 144 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm23539-201ENSMUST00000157537 224 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5□□□□□ -1.61
Sox6P40645 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5□□□□□ -1.61
Sox6P40645 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5□□□□□ -1.61
Sox6P40645 Gm27266-201ENSMUST00000184521 123 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5□□□□□ -1.61
Sox6P40645 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5□□□□□ -1.61
Sox6P40645 Gm43516-201ENSMUST00000196891 322 ntBASIC5□□□□□ -1.61
Sox6P40645 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5□□□□□ -1.61
Sox6P40645 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5□□□□□ -1.61
Sox6P40645 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5□□□□□ -1.61
Sox6P40645 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5□□□□□ -1.61
Sox6P40645 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sox6P40645 Gm44829-201ENSMUST00000208008 3193 ntBASIC5□□□□□ -1.61
Sox6P40645 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Sox6P40645 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 Gm37488-201ENSMUST00000195434 3374 ntBASIC5□□□□□ -1.61
Sox6P40645 Gm43085-201ENSMUST00000202859 3132 ntBASIC5□□□□□ -1.61
Sox6P40645 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5□□□□□ -1.61
Sox6P40645 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sox6P40645 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox6P40645 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sox6P40645 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5□□□□□ -1.61
Sox6P40645 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sox6P40645 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sox6P40645 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Sox6P40645 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.99□□□□□ -1.61
Sox6P40645 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Gm5381-201ENSMUST00000117975 1250 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Sox6P40645 Gm12768-201ENSMUST00000120055 759 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm12731-201ENSMUST00000120932 268 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm14957-201ENSMUST00000121069 817 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.99□□□□□ -1.61
Sox6P40645 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.99□□□□□ -1.61
Sox6P40645 Gm26350-201ENSMUST00000157531 288 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm22518-201ENSMUST00000158267 68 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm25489-201ENSMUST00000158727 141 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm3170-201ENSMUST00000168753 850 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Mir3572-201ENSMUST00000175549 86 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm3348-201ENSMUST00000177813 850 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm27960-201ENSMUST00000183445 184 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm24949-201ENSMUST00000183609 215 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm29509-201ENSMUST00000185716 321 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC4.99□□□□□ -1.61
Sox6P40645 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC4.99□□□□□ -1.61
Sox6P40645 Gm29376-201ENSMUST00000189357 835 ntBASIC4.99□□□□□ -1.61
Sox6P40645 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Gm36939-201ENSMUST00000194889 439 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Mir219c-201ENSMUST00000199860 60 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.99□□□□□ -1.61
Sox6P40645 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.99□□□□□ -1.61
Sox6P40645 Gm6477-201ENSMUST00000217098 764 ntBASIC4.99□□□□□ -1.61
Sox6P40645 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.99□□□□□ -1.61
Sox6P40645 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.99□□□□□ -1.61
Sox6P40645 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.99□□□□□ -1.61
Sox6P40645 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Sox6P40645 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sox6P40645 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sox6P40645 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC4.98□□□□□ -1.61
Sox6P40645 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.98□□□□□ -1.61
Sox6P40645 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.98□□□□□ -1.61
Sox6P40645 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sox6P40645 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.98□□□□□ -1.61
Sox6P40645 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Sox6P40645 Gm11826-201ENSMUST00000118781 438 ntBASIC4.98□□□□□ -1.61
Sox6P40645 Gm14716-201ENSMUST00000120138 718 ntBASIC4.98□□□□□ -1.61
Sox6P40645 Gm12936-201ENSMUST00000121439 301 ntBASIC4.98□□□□□ -1.61
Sox6P40645 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.98□□□□□ -1.61
Sox6P40645 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC4.98□□□□□ -1.61
Sox6P40645 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sox6P40645 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sox6P40645 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.98□□□□□ -1.61
Sox6P40645 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.98□□□□□ -1.61
Sox6P40645 Gm27820-201ENSMUST00000183628 175 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms