Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC7.43□□□□□ -1.22
Col18a1P39061 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC7.43□□□□□ -1.22
Col18a1P39061 Gm10145-201ENSMUST00000077776 462 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm23423-201ENSMUST00000082782 106 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Gm10705-201ENSMUST00000098980 461 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 AC152944.1-201ENSMUST00000220160 3101 ntBASIC7.43□□□□□ -1.22
Col18a1P39061 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col18a1P39061 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Col18a1P39061 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col18a1P39061 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC7.42□□□□□ -1.22
Col18a1P39061 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col18a1P39061 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Col18a1P39061 Gm22020-201ENSMUST00000104358 136 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Gm11260-201ENSMUST00000121163 942 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Col18a1P39061 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Mir7074-201ENSMUST00000183884 63 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Gm44412-201ENSMUST00000203018 294 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Gm19095-201ENSMUST00000220533 730 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Gm4263-201ENSMUST00000220693 1101 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 AC121542.1-201ENSMUST00000227245 721 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
Col18a1P39061 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Col18a1P39061 Gm26203-201ENSMUST00000082911 114 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Col18a1P39061 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Col18a1P39061 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col18a1P39061 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC7.42□□□□□ -1.22
Col18a1P39061 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Col18a1P39061 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Gm45633-201ENSMUST00000210669 3253 ntBASIC7.42□□□□□ -1.22
Col18a1P39061 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col18a1P39061 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC7.41□□□□□ -1.22
Col18a1P39061 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC7.41□□□□□ -1.22
Col18a1P39061 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col18a1P39061 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm14751-201ENSMUST00000117693 222 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm12110-201ENSMUST00000121601 579 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col18a1P39061 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC7.41□□□□□ -1.22
Col18a1P39061 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm2617-201ENSMUST00000185690 1066 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC7.41□□□□□ -1.22
Col18a1P39061 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm42857-201ENSMUST00000200823 339 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm44946-201ENSMUST00000208425 572 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 AC110816.1-201ENSMUST00000218559 980 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 AC109180.1-201ENSMUST00000218676 398 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Olfr151-202ENSMUST00000221099 929 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm17915-201ENSMUST00000222077 548 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 AL590614.1-201ENSMUST00000226037 268 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Mir346-201ENSMUST00000083547 98 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col18a1P39061 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm37926-201ENSMUST00000191922 2424 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col18a1P39061 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col18a1P39061 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.41□□□□□ -1.22
Col18a1P39061 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm8215-201ENSMUST00000120627 990 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm14710-201ENSMUST00000146082 1066 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm2622-201ENSMUST00000200018 471 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC7.41□□□□□ -1.22
Col18a1P39061 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm44954-201ENSMUST00000208513 227 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC7.41□□□□□ -1.22
Col18a1P39061 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC7.41□□□□□ -1.22
Col18a1P39061 Platr25-208ENSMUST00000222602 939 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 AC113031.2-201ENSMUST00000226132 579 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 AC140451.2-202ENSMUST00000226156 574 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Gm23796-201ENSMUST00000084011 160 ntBASIC7.41□□□□□ -1.22
Col18a1P39061 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col18a1P39061 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms