Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.29□□□□□ -1.72
Sdc1P18828 AC124826.1-201ENSMUST00000221651 325 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Sdc1P18828 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.29□□□□□ -1.72
Sdc1P18828 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Sdc1P18828 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Sdc1P18828 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Sdc1P18828 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Sdc1P18828 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm15332-201ENSMUST00000118386 357 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm12704-201ENSMUST00000119789 464 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm12849-201ENSMUST00000120013 739 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm15780-201ENSMUST00000121283 935 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm6175-201ENSMUST00000121351 400 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm12807-201ENSMUST00000121546 962 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm24422-201ENSMUST00000157800 119 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Sdc1P18828 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm15257-201ENSMUST00000177680 883 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm15252-201ENSMUST00000177750 883 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm15260-201ENSMUST00000179402 883 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm26557-201ENSMUST00000180756 493 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm29383-201ENSMUST00000188284 480 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Sdc1P18828 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm42990-201ENSMUST00000199231 312 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Igkv4-77-201ENSMUST00000199410 352 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm42643-201ENSMUST00000200504 279 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.28□□□□□ -1.72
Sdc1P18828 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC4.28□□□□□ -1.72
Sdc1P18828 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC4.28□□□□□ -1.72
Sdc1P18828 AC153357.1-201ENSMUST00000219190 482 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm3086-202ENSMUST00000221248 310 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 AC156559.2-201ENSMUST00000224403 384 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 AC166105.1-201ENSMUST00000227512 482 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Sdc1P18828 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Sdc1P18828 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.28□□□□□ -1.72
Sdc1P18828 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sdc1P18828 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Sdc1P18828 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Sdc1P18828 AC115289.2-201ENSMUST00000223836 2803 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sdc1P18828 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Sdc1P18828 Mir683-2-201ENSMUST00000102099 109 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Mir676-201ENSMUST00000102443 89 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm25093-201ENSMUST00000103993 132 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm13739-201ENSMUST00000118020 530 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm13808-201ENSMUST00000121353 184 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Sms-ps-201ENSMUST00000121773 1101 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Rps29-ps-201ENSMUST00000122083 172 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.27□□□□□ -1.73
Sdc1P18828 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC4.27□□□□□ -1.73
Sdc1P18828 Gm26355-201ENSMUST00000158220 105 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms