Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm5401-201ENSMUST00000122444 365 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC4.48□□□□□ -1.69
Cdx1P18111 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx1P18111 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm26983-201ENSMUST00000182051 388 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm27024-201ENSMUST00000182561 755 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm27849-201ENSMUST00000183673 125 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Mir6952-201ENSMUST00000185092 61 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm21617-201ENSMUST00000188297 691 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm8826-201ENSMUST00000193161 948 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm43825-201ENSMUST00000199650 734 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm42666-201ENSMUST00000201954 152 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC4.48□□□□□ -1.69
Cdx1P18111 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm44221-201ENSMUST00000203552 388 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm43945-201ENSMUST00000203595 754 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm19921-201ENSMUST00000210505 703 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm45724-201ENSMUST00000213031 420 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx1P18111 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx1P18111 Nsa2-203ENSMUST00000225410 974 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx1P18111 Mir99a-201ENSMUST00000083596 65 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Cdx1P18111 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx1P18111 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx1P18111 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cdx1P18111 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cdx1P18111 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.47□□□□□ -1.69
Cdx1P18111 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Cdx1P18111 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cdx1P18111 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm37553-201ENSMUST00000194135 1602 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Cdx1P18111 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm12303-201ENSMUST00000119506 673 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm25290-201ENSMUST00000122796 144 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm24441-201ENSMUST00000157235 281 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.47□□□□□ -1.69
Cdx1P18111 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.47□□□□□ -1.69
Cdx1P18111 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm28975-201ENSMUST00000186412 686 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm18183-201ENSMUST00000191024 615 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm36999-201ENSMUST00000192756 1046 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm42663-201ENSMUST00000199883 351 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm19653-201ENSMUST00000204326 1039 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm45422-201ENSMUST00000211476 246 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 AC129323.1-201ENSMUST00000216733 470 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.47□□□□□ -1.69
Cdx1P18111 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cdx1P18111 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdx1P18111 Gm19095-201ENSMUST00000220533 730 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 AV026068-231ENSMUST00000225862 482 ntBASIC4.47□□□□□ -1.69
Cdx1P18111 AC166105.1-201ENSMUST00000227512 482 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms