Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.22□□□□□ -1.73
Hmgb3O54879 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hmgb3O54879 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Hmgb3O54879 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Hmgb3O54879 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Hmgb3O54879 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Hmgb3O54879 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Hmgb3O54879 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.21□□□□□ -1.73
Hmgb3O54879 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.21□□□□□ -1.74
Hmgb3O54879 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm20486-201ENSMUST00000101544 128 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm25593-201ENSMUST00000102272 96 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Mir879-201ENSMUST00000104703 76 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm13787-201ENSMUST00000120422 168 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm13484-201ENSMUST00000120738 412 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm5383-201ENSMUST00000121177 617 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm22599-201ENSMUST00000157597 132 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm22428-201ENSMUST00000158554 132 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm25048-201ENSMUST00000158598 91 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm22116-201ENSMUST00000158791 141 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm15812-201ENSMUST00000162331 748 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Mir5125-201ENSMUST00000175240 79 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm27512-201ENSMUST00000175328 126 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm43973-201ENSMUST00000203562 210 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Clec2j-202ENSMUST00000203658 606 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm4374-201ENSMUST00000204929 424 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm44768-201ENSMUST00000205719 393 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 AC156037.1-201ENSMUST00000221133 127 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC4.21□□□□□ -1.74
Hmgb3O54879 AC125543.3-201ENSMUST00000221991 126 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm22456-201ENSMUST00000082578 125 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm26063-201ENSMUST00000083378 107 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hmgb3O54879 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.21□□□□□ -1.74
Hmgb3O54879 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hmgb3O54879 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Mir700-201ENSMUST00000102169 79 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm23593-201ENSMUST00000104309 120 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm11105-201ENSMUST00000112781 478 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm16044-201ENSMUST00000118475 450 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm7312-201ENSMUST00000118798 469 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm11902-201ENSMUST00000118849 270 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm9005-201ENSMUST00000119908 607 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm12307-201ENSMUST00000120581 590 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm8545-201ENSMUST00000120692 801 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm22959-201ENSMUST00000122514 303 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm23211-201ENSMUST00000122717 308 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hmgb3O54879 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Scarna13-201ENSMUST00000158164 275 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm6047-201ENSMUST00000167221 574 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm21772-201ENSMUST00000169213 478 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm9597-201ENSMUST00000171913 602 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm17126-201ENSMUST00000172276 523 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hmgb3O54879 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm27679-201ENSMUST00000184612 84 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hmgb3O54879 Gm19086-201ENSMUST00000190772 665 ntBASIC4.2□□□□□ -1.74
Hmgb3O54879 Ighv1-30-201ENSMUST00000194082 349 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms