Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm25593-201ENSMUST00000102272 96 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm12468-201ENSMUST00000116189 404 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm14382-201ENSMUST00000117374 437 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm15001-201ENSMUST00000117657 795 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm11854-201ENSMUST00000117839 446 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm13454-201ENSMUST00000118166 483 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm11484-201ENSMUST00000119808 338 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm14725-201ENSMUST00000120324 828 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm6395-201ENSMUST00000167639 691 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm6647-201ENSMUST00000170514 641 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm29550-201ENSMUST00000185543 285 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm45156-201ENSMUST00000207255 439 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm4808-201ENSMUST00000222283 1203 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Pcdh1F7BJK1 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm22591-201ENSMUST00000104243 106 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm25916-201ENSMUST00000104263 131 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm14756-201ENSMUST00000116395 240 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm10074-201ENSMUST00000174543 249 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm21754-201ENSMUST00000177550 479 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm27360-201ENSMUST00000183487 80 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm8676-201ENSMUST00000184206 637 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Mir6362-201ENSMUST00000184329 107 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm18185-201ENSMUST00000186725 667 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm28846-201ENSMUST00000189161 368 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm37477-201ENSMUST00000195215 884 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm43743-202ENSMUST00000198353 491 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Gm44726-201ENSMUST00000203427 217 ntBASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC5.7□□□□□ -1.5
Pcdh1F7BJK1 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms