Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm10145-201ENSMUST00000077776 462 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm25048-201ENSMUST00000158598 91 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm8502-201ENSMUST00000185708 901 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm21147-201ENSMUST00000186046 913 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm29474-201ENSMUST00000187688 379 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm44580-201ENSMUST00000206333 877 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm44683-201ENSMUST00000209088 484 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm8137-201ENSMUST00000218997 463 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.03□□□□□ -1.6
Cdc40Q9DC48 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm13681-201ENSMUST00000117925 210 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm14472-201ENSMUST00000119815 282 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm14601-201ENSMUST00000120892 236 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm25430-201ENSMUST00000157614 289 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm22116-201ENSMUST00000158791 141 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm3307-201ENSMUST00000176164 632 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm18969-201ENSMUST00000189423 730 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm5734-201ENSMUST00000189787 913 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm43078-201ENSMUST00000197222 168 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm43712-201ENSMUST00000198020 291 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm18007-201ENSMUST00000205019 844 ntBASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.02□□□□□ -1.61
Cdc40Q9DC48 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms