Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm42967-201ENSMUST00000198647 2312 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm4914-201ENSMUST00000119757 459 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm9005-201ENSMUST00000119908 607 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm6446-201ENSMUST00000120604 818 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm23792-201ENSMUST00000122557 93 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm24444-201ENSMUST00000157244 308 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm9671-201ENSMUST00000171502 547 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm25065-201ENSMUST00000177914 132 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm25891-201ENSMUST00000180050 132 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm37024-201ENSMUST00000192224 868 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm3351-201ENSMUST00000193454 505 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm6631-201ENSMUST00000193699 559 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm37341-201ENSMUST00000194680 371 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm37196-201ENSMUST00000194762 906 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm18150-201ENSMUST00000195341 645 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm3933-201ENSMUST00000195391 439 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm29736-201ENSMUST00000198189 385 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm2602-201ENSMUST00000202112 571 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm7181-201ENSMUST00000202197 434 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm45071-201ENSMUST00000205353 571 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm44817-201ENSMUST00000205416 453 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm9685-201ENSMUST00000211275 538 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm45696-201ENSMUST00000212088 985 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm34005-201ENSMUST00000215834 282 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 AC121986.1-201ENSMUST00000218588 781 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm8137-201ENSMUST00000218997 463 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 AC126043.1-201ENSMUST00000221304 1141 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 AC140393.2-201ENSMUST00000226894 943 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm24029-201ENSMUST00000083928 143 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm5746-201ENSMUST00000183550 2200 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.25□□□□□ -1.41
Ddx56Q9D0R4 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Mir449c-201ENSMUST00000102192 109 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm12890-201ENSMUST00000120885 373 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm11882-201ENSMUST00000121463 506 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm13531-201ENSMUST00000121893 543 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm25966-201ENSMUST00000157169 117 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm26354-201ENSMUST00000158221 129 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Mir3060-201ENSMUST00000175339 83 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm17048-201ENSMUST00000179266 847 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm29124-201ENSMUST00000186576 452 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm29475-201ENSMUST00000190767 312 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 Gm6702-201ENSMUST00000208496 471 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.24□□□□□ -1.41
Ddx56Q9D0R4 AC163664.1-201ENSMUST00000226251 1248 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms