Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim13Q9CYB0 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Trim13Q9CYB0 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim13Q9CYB0 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim13Q9CYB0 Gm7739-201ENSMUST00000221131 1560 ntBASIC6.06□□□□□ -1.44
Trim13Q9CYB0 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim13Q9CYB0 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm14279-201ENSMUST00000117142 332 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm10243-201ENSMUST00000117571 333 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm9439-201ENSMUST00000119554 973 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm13627-201ENSMUST00000119700 706 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm14852-201ENSMUST00000120065 647 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm11533-201ENSMUST00000120287 477 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm14269-201ENSMUST00000120455 306 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm14613-201ENSMUST00000122239 752 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm26023-201ENSMUST00000122722 313 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm25962-201ENSMUST00000157173 168 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm7420-201ENSMUST00000162836 842 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm26959-201ENSMUST00000182376 978 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm29160-201ENSMUST00000190094 699 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm26413-201ENSMUST00000196783 126 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm43559-201ENSMUST00000198755 466 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm17918-201ENSMUST00000205315 574 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm45196-201ENSMUST00000206751 825 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm24921-201ENSMUST00000083024 107 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm23097-201ENSMUST00000083448 105 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim13Q9CYB0 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim13Q9CYB0 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.04□□□□□ -1.44
Trim13Q9CYB0 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim13Q9CYB0 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim13Q9CYB0 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim13Q9CYB0 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim13Q9CYB0 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.04□□□□□ -1.44
Trim13Q9CYB0 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.04□□□□□ -1.44
Trim13Q9CYB0 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim13Q9CYB0 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms