Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm10064-201ENSMUST00000071235 399 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Smc1aQ9CU62 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm23750-201ENSMUST00000104222 132 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm3307-201ENSMUST00000176164 632 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm29284-201ENSMUST00000188363 255 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm18969-201ENSMUST00000189423 730 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm28507-201ENSMUST00000189737 703 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm43712-201ENSMUST00000198020 291 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm44330-201ENSMUST00000200106 143 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Snord59a-201ENSMUST00000082844 74 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm43462-201ENSMUST00000200265 3648 ntBASIC6.1□□□□□ -1.43
Smc1aQ9CU62 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm25758-201ENSMUST00000103987 129 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm11699-201ENSMUST00000119016 401 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm24940-201ENSMUST00000158326 108 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Mir3062-201ENSMUST00000174986 105 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm5139-201ENSMUST00000175943 249 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm35648-201ENSMUST00000202304 475 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm18007-201ENSMUST00000205019 844 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm4587-201ENSMUST00000209135 637 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm2099-201ENSMUST00000220979 412 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Smc1aQ9CU62 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Smc1aQ9CU62 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Smc1aQ9CU62 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Smc1aQ9CU62 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
Smc1aQ9CU62 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.09□□□□□ -1.44
Smc1aQ9CU62 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC6.08□□□□□ -1.44
Smc1aQ9CU62 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms