Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm7499-201ENSMUST00000210423 813 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 AC153801.1-201ENSMUST00000217904 947 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm25810-201ENSMUST00000082752 108 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm24917-201ENSMUST00000083935 104 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Olfr467-201ENSMUST00000084756 927 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm10780-201ENSMUST00000099459 285 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cstf3Q99LI7 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm13428-201ENSMUST00000117540 365 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm14621-201ENSMUST00000117709 689 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm11774-201ENSMUST00000118601 293 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm13473-201ENSMUST00000119289 367 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm3091-201ENSMUST00000163408 484 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm6872-201ENSMUST00000165001 700 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm22655-201ENSMUST00000174949 96 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm18415-201ENSMUST00000177464 647 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm27653-201ENSMUST00000185037 136 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm28885-201ENSMUST00000185615 563 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm28438-201ENSMUST00000188299 345 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm44319-201ENSMUST00000196974 93 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm20940-201ENSMUST00000197308 360 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm2691-201ENSMUST00000203205 901 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm44604-201ENSMUST00000205475 496 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm25739-201ENSMUST00000082886 107 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Gm37303-201ENSMUST00000194202 1559 ntBASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cstf3Q99LI7 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm11970-201ENSMUST00000116105 320 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm23839-201ENSMUST00000116957 109 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm15741-201ENSMUST00000119401 754 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm15225-201ENSMUST00000120449 1017 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm8545-201ENSMUST00000120692 801 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm14237-201ENSMUST00000122080 430 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm14363-201ENSMUST00000122304 409 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm24186-201ENSMUST00000157983 127 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm21999-201ENSMUST00000165985 387 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm27679-201ENSMUST00000184612 84 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm27219-201ENSMUST00000184633 742 ntBASIC5.36□□□□□ -1.55
Cstf3Q99LI7 Gm27148-201ENSMUST00000185086 160 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms