Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm12717-201ENSMUST00000118427 983 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm14874-201ENSMUST00000118995 438 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm12375-201ENSMUST00000119331 921 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm4853-201ENSMUST00000119359 394 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm14485-201ENSMUST00000119489 493 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm23673-201ENSMUST00000157474 298 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm25989-201ENSMUST00000158761 133 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm24175-201ENSMUST00000158931 129 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm20519-201ENSMUST00000173684 359 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm24812-201ENSMUST00000175315 284 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm28439-201ENSMUST00000187714 876 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm37883-201ENSMUST00000194970 725 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm31861-201ENSMUST00000204563 672 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 LOC665443-201ENSMUST00000212284 796 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ccdc28bQ8CEG5 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm6027-201ENSMUST00000121467 756 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm23207-201ENSMUST00000158665 102 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm16139-201ENSMUST00000160015 420 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm6264-201ENSMUST00000160802 624 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Mir7011-201ENSMUST00000183768 73 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm28934-201ENSMUST00000186491 346 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm3351-201ENSMUST00000193454 505 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm43973-201ENSMUST00000203562 210 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm45700-201ENSMUST00000205866 347 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm17999-201ENSMUST00000211568 542 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm24919-201ENSMUST00000083020 106 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc28bQ8CEG5 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms