Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm27512-201ENSMUST00000175328 126 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm27210-201ENSMUST00000184263 402 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm29124-201ENSMUST00000186576 452 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm37751-201ENSMUST00000192440 1198 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm7181-201ENSMUST00000202197 434 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm10095-201ENSMUST00000222765 483 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 AC131068.1-201ENSMUST00000226891 482 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm8256-203ENSMUST00000228692 591 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm23456-201ENSMUST00000083335 137 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 AC154552.6-201ENSMUST00000221365 1342 ntBASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc87Q8CDL9 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm12643-201ENSMUST00000116078 374 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm2003-201ENSMUST00000118537 636 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm15877-201ENSMUST00000121897 964 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm1989-201ENSMUST00000126244 636 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm17043-201ENSMUST00000164621 1283 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm28527-201ENSMUST00000185210 297 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm28934-201ENSMUST00000186491 346 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm37341-201ENSMUST00000194680 371 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm44312-201ENSMUST00000203536 469 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm44038-201ENSMUST00000203952 889 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm18467-201ENSMUST00000208805 434 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm18205-201ENSMUST00000209215 841 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 AV026068-216ENSMUST00000223874 328 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.15□□□□□ -1.42
Ccdc87Q8CDL9 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 AC149294.7-201ENSMUST00000227475 1432 ntBASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc87Q8CDL9 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms