Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm37965-201ENSMUST00000195304 1362 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm14106-201ENSMUST00000119382 438 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm14599-201ENSMUST00000120469 474 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm14679-201ENSMUST00000121536 722 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm22959-201ENSMUST00000122514 303 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Mir3080-201ENSMUST00000175010 79 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm43148-201ENSMUST00000198237 520 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm2691-201ENSMUST00000203205 901 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm7443-201ENSMUST00000206355 378 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm44615-201ENSMUST00000206548 358 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm45596-201ENSMUST00000209279 434 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm45777-201ENSMUST00000213009 301 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm10709-201ENSMUST00000213318 480 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm18705-201ENSMUST00000215985 913 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm23737-201ENSMUST00000082547 159 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm24525-201ENSMUST00000082917 151 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm25682-201ENSMUST00000083942 164 ntBASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps53Q8CCB4 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm22499-201ENSMUST00000104501 135 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm14520-201ENSMUST00000119258 387 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm4910-201ENSMUST00000119605 366 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm22993-201ENSMUST00000175423 254 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm27355-201ENSMUST00000185045 128 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm28149-201ENSMUST00000187102 378 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm28768-201ENSMUST00000189034 378 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm43774-201ENSMUST00000196327 878 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm9057-201ENSMUST00000198791 296 ntBASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.56□□□□□ -1.36
Vps53Q8CCB4 Gm19201-201ENSMUST00000210127 778 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms