Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm20691-201ENSMUST00000176889 333 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Mup-ps7-201ENSMUST00000178292 545 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Mup-ps8-201ENSMUST00000178663 545 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Mup-ps9-201ENSMUST00000178847 545 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Mup-ps6-201ENSMUST00000179564 545 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm28058-201ENSMUST00000186421 264 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm9278-201ENSMUST00000205508 553 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm44959-201ENSMUST00000209127 231 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 CR974485.1-201ENSMUST00000222408 402 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Olfr512-201ENSMUST00000074730 1056 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 n-R5s94-201ENSMUST00000082573 119 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm22053-201ENSMUST00000083394 200 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm7731-201ENSMUST00000091759 470 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Trim47Q8C0E3 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm13503-201ENSMUST00000119017 446 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm12515-201ENSMUST00000120116 361 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm7700-201ENSMUST00000120273 970 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm7494-201ENSMUST00000121248 441 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Llph-ps1-201ENSMUST00000121281 390 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm24444-201ENSMUST00000157244 308 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm23824-201ENSMUST00000158741 276 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm20615-201ENSMUST00000177503 705 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm9285-201ENSMUST00000177691 697 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm37828-201ENSMUST00000192496 432 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm36448-201ENSMUST00000199916 438 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm32983-201ENSMUST00000208500 505 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm8291-201ENSMUST00000209635 1261 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 AC174797.3-202ENSMUST00000224578 587 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 AC124569.1-201ENSMUST00000225932 101 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 AC158982.2-201ENSMUST00000226283 184 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 n-R5s86-201ENSMUST00000083215 119 ntBASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Trim47Q8C0E3 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms