Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 AC121997.2-201ENSMUST00000228095 2294 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm14985-201ENSMUST00000118693 786 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm12281-201ENSMUST00000119536 298 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Ear-ps9-201ENSMUST00000161963 460 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Mir7056-201ENSMUST00000183776 59 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm6717-201ENSMUST00000185549 838 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Ighv1-3-201ENSMUST00000192764 302 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm9317-201ENSMUST00000197055 862 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm17775-201ENSMUST00000198542 258 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm45722-201ENSMUST00000213075 466 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 AC133517.2-201ENSMUST00000226820 690 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Mir199a-2-201ENSMUST00000093618 110 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm13615-201ENSMUST00000120242 1612 ntBASIC7.41□□□□□ -1.22
Usp47Q8BY87 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Usp47Q8BY87 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm19131-202ENSMUST00000203464 3208 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm43437-201ENSMUST00000198535 3955 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm23274-201ENSMUST00000104056 130 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm16060-201ENSMUST00000153140 478 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm25383-201ENSMUST00000157810 144 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm28385-201ENSMUST00000185671 292 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm17766-201ENSMUST00000209223 442 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Olfr151-202ENSMUST00000221099 929 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 AC124549.1-201ENSMUST00000225912 333 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Gm4963-201ENSMUST00000072718 378 ntBASIC7.4□□□□□ -1.22
Usp47Q8BY87 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Usp47Q8BY87 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC7.4□□□□□ -1.23
Usp47Q8BY87 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Usp47Q8BY87 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Gm13452-201ENSMUST00000120896 1097 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Gm22725-201ENSMUST00000158092 110 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Gm6632-201ENSMUST00000168425 954 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Gm2053-201ENSMUST00000195671 631 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Gm2623-201ENSMUST00000199229 286 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Usp47Q8BY87 AC154657.1-201ENSMUST00000226394 775 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 AC137117.1-201ENSMUST00000226912 441 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 AC121978.1-201ENSMUST00000228357 380 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Mir31-201ENSMUST00000083474 106 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 AC151971.5-201ENSMUST00000214422 3254 ntBASIC7.39□□□□□ -1.23
Usp47Q8BY87 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Usp47Q8BY87 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Usp47Q8BY87 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC7.38□□□□□ -1.23
Usp47Q8BY87 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Usp47Q8BY87 Gm24170-201ENSMUST00000104124 133 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms