Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm11984-201ENSMUST00000118142 766 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm11920-201ENSMUST00000118491 563 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm11708-201ENSMUST00000119530 832 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm11726-201ENSMUST00000121028 424 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm25550-201ENSMUST00000158079 128 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm16236-201ENSMUST00000159588 379 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm17137-202ENSMUST00000165729 957 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm22701-201ENSMUST00000175371 291 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Mir7005-201ENSMUST00000185089 69 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm9541-201ENSMUST00000188409 502 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm37869-201ENSMUST00000193385 595 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm7804-202ENSMUST00000194187 854 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm43048-201ENSMUST00000196101 388 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm43007-201ENSMUST00000197618 291 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm7499-201ENSMUST00000210423 813 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm18997-201ENSMUST00000216353 822 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm30738-201ENSMUST00000221346 502 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 AC154506.3-201ENSMUST00000225417 213 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm15732-201ENSMUST00000079794 480 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm37936-201ENSMUST00000194647 1322 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Gm14442-201ENSMUST00000119690 1736 ntBASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Scaf4Q6PFF0 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm2199-201ENSMUST00000119065 874 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm7571-201ENSMUST00000120252 927 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm14998-201ENSMUST00000120502 495 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm13121-201ENSMUST00000120637 632 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm15316-201ENSMUST00000121082 421 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm5166-201ENSMUST00000121332 573 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm11385-201ENSMUST00000121513 570 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm20612-201ENSMUST00000176318 236 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm29385-201ENSMUST00000186831 363 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm28114-201ENSMUST00000187232 379 ntBASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.12□□□□□ -1.43
Scaf4Q6PFF0 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms