Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Rnu11-201ENSMUST00000104135 134 ntBASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm12322-201ENSMUST00000121605 389 ntBASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm5110-201ENSMUST00000203122 1063 ntBASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm45122-201ENSMUST00000206376 784 ntBASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 AC154452.1-201ENSMUST00000225819 241 ntBASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm24490-201ENSMUST00000083803 98 ntBASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim41Q5NCC3 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm25970-201ENSMUST00000157165 86 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm23891-201ENSMUST00000158114 138 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm26426-201ENSMUST00000177866 123 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm26060-201ENSMUST00000180094 123 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm28191-201ENSMUST00000189112 211 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 AC158750.1-201ENSMUST00000226163 634 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 AC117202.1-201ENSMUST00000227007 445 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm13230-201ENSMUST00000120870 1575 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm37611-201ENSMUST00000195250 2028 ntBASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim41Q5NCC3 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm43099-201ENSMUST00000198943 5241 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm2223-201ENSMUST00000112099 1350 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm11914-201ENSMUST00000117094 507 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC11.73□□□□□ -0.53
Trim41Q5NCC3 Gm26509-201ENSMUST00000180947 948 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms