Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 n-R5s72-201ENSMUST00000104518 119 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm23910-201ENSMUST00000104597 132 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm14939-201ENSMUST00000120347 680 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm24592-201ENSMUST00000122505 106 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm23212-201ENSMUST00000122718 60 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.5□□□□□ -1.53
Col8a1Q00780 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm25553-201ENSMUST00000158076 79 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Adgrg4-206ENSMUST00000168724 531 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm22548-201ENSMUST00000174899 78 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Mir199b-201ENSMUST00000175066 110 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Mir5107-201ENSMUST00000175586 88 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm20691-201ENSMUST00000176889 333 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm16531-201ENSMUST00000180658 967 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm1972-201ENSMUST00000181606 964 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm28883-201ENSMUST00000189256 369 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm2996-201ENSMUST00000211398 537 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 AC165146.1-201ENSMUST00000223777 900 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.5□□□□□ -1.53
Col8a1Q00780 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col8a1Q00780 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col8a1Q00780 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 CT009604.1-201ENSMUST00000223900 1328 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm25647-201ENSMUST00000101832 78 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm25823-201ENSMUST00000101995 78 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Mir190b-201ENSMUST00000104803 80 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm7146-201ENSMUST00000116079 739 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm22676-201ENSMUST00000116972 129 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm13006-201ENSMUST00000118683 214 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm11617-201ENSMUST00000119609 639 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm11852-201ENSMUST00000120806 222 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm14038-201ENSMUST00000121500 807 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm13024-201ENSMUST00000121756 718 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm15096-201ENSMUST00000121918 878 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm13602-201ENSMUST00000122405 493 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm16248-201ENSMUST00000124238 243 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm15501-202ENSMUST00000140687 625 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm25374-201ENSMUST00000158158 101 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm24369-201ENSMUST00000175387 96 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm24220-201ENSMUST00000177753 79 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm25988-201ENSMUST00000177759 79 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm23471-201ENSMUST00000177886 79 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm26488-201ENSMUST00000178225 79 ntBASIC5.49□□□□□ -1.53
Col8a1Q00780 Gm23449-201ENSMUST00000179208 79 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms