Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.03□□□□□ -1.6
Scn1bP97952 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.03□□□□□ -1.6
Scn1bP97952 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.03□□□□□ -1.6
Scn1bP97952 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn1bP97952 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm12988-201ENSMUST00000119054 478 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm12577-201ENSMUST00000119701 574 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm15019-201ENSMUST00000120148 434 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm8722-201ENSMUST00000121466 769 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm14679-201ENSMUST00000121536 722 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm13508-201ENSMUST00000121639 775 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm15237-201ENSMUST00000122104 469 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm22084-201ENSMUST00000157585 105 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.03□□□□□ -1.6
Scn1bP97952 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm21909-201ENSMUST00000178260 439 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm9320-201ENSMUST00000184151 473 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.03□□□□□ -1.6
Scn1bP97952 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm28586-201ENSMUST00000189857 456 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Trbv28-201ENSMUST00000192804 264 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm37809-201ENSMUST00000195050 931 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.03□□□□□ -1.6
Scn1bP97952 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm43316-201ENSMUST00000197252 1295 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm31532-201ENSMUST00000203555 767 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm8719-201ENSMUST00000203602 534 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm43930-201ENSMUST00000203868 845 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.03□□□□□ -1.6
Scn1bP97952 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.03□□□□□ -1.6
Scn1bP97952 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn1bP97952 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn1bP97952 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn1bP97952 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm24200-201ENSMUST00000082955 157 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.03□□□□□ -1.6
Scn1bP97952 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scn1bP97952 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm16074-201ENSMUST00000119524 444 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Gm12396-201ENSMUST00000121600 306 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm5125-201ENSMUST00000148614 624 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Gm26350-201ENSMUST00000157531 288 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Gm24767-201ENSMUST00000158509 95 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.02□□□□□ -1.61
Scn1bP97952 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scn1bP97952 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scn1bP97952 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms