Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm20074-201ENSMUST00000208144 484 ntBASIC5.98□□□□□ -1.45
CiitaP79621 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.98□□□□□ -1.45
CiitaP79621 Gm45870-201ENSMUST00000211269 601 ntBASIC5.98□□□□□ -1.45
CiitaP79621 Gm7439-201ENSMUST00000214053 835 ntBASIC5.98□□□□□ -1.45
CiitaP79621 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.98□□□□□ -1.45
CiitaP79621 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.98□□□□□ -1.45
CiitaP79621 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.98□□□□□ -1.45
CiitaP79621 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CiitaP79621 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CiitaP79621 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.98□□□□□ -1.45
CiitaP79621 Mir449a-201ENSMUST00000083641 91 ntBASIC5.98□□□□□ -1.45
CiitaP79621 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CiitaP79621 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CiitaP79621 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CiitaP79621 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.98□□□□□ -1.45
CiitaP79621 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CiitaP79621 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CiitaP79621 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CiitaP79621 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CiitaP79621 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CiitaP79621 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
CiitaP79621 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Gm13537-201ENSMUST00000120467 267 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm11804-201ENSMUST00000121663 468 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm11679-201ENSMUST00000121830 779 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.97□□□□□ -1.45
CiitaP79621 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Gm25824-201ENSMUST00000157092 121 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Mir3110-201ENSMUST00000175053 80 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Mir5128-201ENSMUST00000175217 84 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
CiitaP79621 Mir7687-201ENSMUST00000184722 59 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm2325-201ENSMUST00000186637 581 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm6137-201ENSMUST00000187552 578 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm21654-201ENSMUST00000188086 691 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm28429-201ENSMUST00000188521 363 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.97□□□□□ -1.45
CiitaP79621 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Gm38185-201ENSMUST00000193195 694 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm6057-201ENSMUST00000195927 314 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm4587-201ENSMUST00000209135 637 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
CiitaP79621 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CiitaP79621 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CiitaP79621 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CiitaP79621 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.97□□□□□ -1.45
CiitaP79621 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CiitaP79621 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.97□□□□□ -1.45
CiitaP79621 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.96□□□□□ -1.45
CiitaP79621 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CiitaP79621 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms