Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 AC136019.1-201ENSMUST00000226503 1412 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm22952-201ENSMUST00000116720 120 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm14554-201ENSMUST00000119548 661 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm14489-201ENSMUST00000120868 901 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.62□□□□□ -1.35
Hmgb1P63158 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm25989-201ENSMUST00000158761 133 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm24734-201ENSMUST00000158860 262 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm16298-201ENSMUST00000161107 420 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm16563-201ENSMUST00000162673 423 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.62□□□□□ -1.35
Hmgb1P63158 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm43476-201ENSMUST00000197873 405 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.62□□□□□ -1.35
Hmgb1P63158 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.62□□□□□ -1.35
Hmgb1P63158 AC159244.1-201ENSMUST00000220964 594 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Olfr881-201ENSMUST00000074611 948 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Mir3068-201ENSMUST00000083004 136 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Hmgb1P63158 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Hmgb1P63158 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC6.62□□□□□ -1.35
Hmgb1P63158 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm22543-201ENSMUST00000104347 94 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm13641-201ENSMUST00000117993 473 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm15765-201ENSMUST00000118407 910 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm11877-201ENSMUST00000118921 852 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm11472-201ENSMUST00000121305 556 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm6977-201ENSMUST00000121568 512 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm12591-201ENSMUST00000122407 1177 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm25806-201ENSMUST00000122782 122 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Mir1960-201ENSMUST00000157488 78 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm25520-201ENSMUST00000158389 118 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm3715-201ENSMUST00000172308 617 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm24111-201ENSMUST00000175491 97 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm21809-201ENSMUST00000178495 468 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm17412-201ENSMUST00000179261 468 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm9443-201ENSMUST00000188406 816 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm20776-201ENSMUST00000189940 700 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm37774-201ENSMUST00000194401 245 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm6543-201ENSMUST00000197353 808 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm29736-201ENSMUST00000198189 385 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm18290-201ENSMUST00000202900 844 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm44023-201ENSMUST00000203710 469 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm45228-201ENSMUST00000206585 352 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm18877-201ENSMUST00000207706 539 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC6.61□□□□□ -1.35
Hmgb1P63158 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.61□□□□□ -1.35
Hmgb1P63158 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmgb1P63158 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Hmgb1P63158 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms