Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.39□□□□□ -1.39
Traf1P39428 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Traf1P39428 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Gm15428-201ENSMUST00000121352 333 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.39□□□□□ -1.39
Traf1P39428 Gm25430-201ENSMUST00000157614 289 ntBASIC6.39□□□□□ -1.39
Traf1P39428 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.39□□□□□ -1.39
Traf1P39428 Gm21654-201ENSMUST00000188086 691 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Gm28429-201ENSMUST00000188521 363 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Gm38185-201ENSMUST00000193195 694 ntBASIC6.39□□□□□ -1.39
Traf1P39428 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC6.39□□□□□ -1.39
Traf1P39428 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.39□□□□□ -1.39
Traf1P39428 Gm3257-201ENSMUST00000207217 675 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.39□□□□□ -1.39
Traf1P39428 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.39□□□□□ -1.39
Traf1P39428 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Traf1P39428 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Traf1P39428 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Traf1P39428 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC6.39□□□□□ -1.39
Traf1P39428 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.39□□□□□ -1.39
Traf1P39428 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Traf1P39428 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Traf1P39428 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Traf1P39428 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
Traf1P39428 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Traf1P39428 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Traf1P39428 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Traf1P39428 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Traf1P39428 Mir466i-201ENSMUST00000116924 121 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Gm11270-201ENSMUST00000117685 471 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Gm14871-201ENSMUST00000119056 194 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.38□□□□□ -1.39
Traf1P39428 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.38□□□□□ -1.39
Traf1P39428 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.38□□□□□ -1.39
Traf1P39428 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Traf1P39428 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Traf1P39428 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Traf1P39428 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.38□□□□□ -1.39
Traf1P39428 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Traf1P39428 Gm27754-201ENSMUST00000183340 126 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.38□□□□□ -1.39
Traf1P39428 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.38□□□□□ -1.39
Traf1P39428 Gm17952-201ENSMUST00000193914 747 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.38□□□□□ -1.39
Traf1P39428 Gm44580-201ENSMUST00000206333 877 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.38□□□□□ -1.39
Traf1P39428 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Traf1P39428 AC158142.3-201ENSMUST00000226230 675 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Traf1P39428 Gm22807-201ENSMUST00000082737 129 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Gm23511-201ENSMUST00000083084 164 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Traf1P39428 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Traf1P39428 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Traf1P39428 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Traf1P39428 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Traf1P39428 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Traf1P39428 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Traf1P39428 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Traf1P39428 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Traf1P39428 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.38□□□□□ -1.39
Traf1P39428 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.37□□□□□ -1.39
Traf1P39428 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Traf1P39428 Gm8595-201ENSMUST00000118250 630 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Gm14267-201ENSMUST00000119751 496 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Gm13488-201ENSMUST00000120419 179 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Traf1P39428 Gm24295-201ENSMUST00000158298 131 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Mir3473a-201ENSMUST00000175011 78 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Gm3307-201ENSMUST00000176164 632 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.37□□□□□ -1.39
Traf1P39428 Gm2914-201ENSMUST00000186120 328 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms