Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Gm14237-201ENSMUST00000122080 430 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm22186-201ENSMUST00000157822 122 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm3102-201ENSMUST00000164236 489 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm17064-201ENSMUST00000167690 452 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm20480-201ENSMUST00000173953 250 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm23631-201ENSMUST00000175291 123 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
LdlrP35951 Gm7745-201ENSMUST00000182235 973 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.87□□□□□ -1.47
LdlrP35951 Gm7299-201ENSMUST00000194441 581 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.87□□□□□ -1.47
LdlrP35951 Gm18427-201ENSMUST00000195422 515 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm4332-201ENSMUST00000196114 346 ntBASIC5.87□□□□□ -1.47
LdlrP35951 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Gm43779-201ENSMUST00000196691 829 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.87□□□□□ -1.47
LdlrP35951 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.87□□□□□ -1.47
LdlrP35951 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.87□□□□□ -1.47
LdlrP35951 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.87□□□□□ -1.47
LdlrP35951 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.87□□□□□ -1.47
LdlrP35951 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LdlrP35951 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LdlrP35951 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LdlrP35951 Gm26163-201ENSMUST00000083792 178 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LdlrP35951 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
LdlrP35951 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LdlrP35951 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
LdlrP35951 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.87□□□□□ -1.47
LdlrP35951 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.86□□□□□ -1.47
LdlrP35951 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LdlrP35951 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
LdlrP35951 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Gm23987-201ENSMUST00000117039 129 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Gm16053-201ENSMUST00000120511 188 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Gm12396-201ENSMUST00000121600 306 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.86□□□□□ -1.47
LdlrP35951 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.86□□□□□ -1.47
LdlrP35951 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.86□□□□□ -1.47
LdlrP35951 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.86□□□□□ -1.47
LdlrP35951 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Gm4725-201ENSMUST00000151048 587 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Gm24363-201ENSMUST00000158440 311 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Gm20453-201ENSMUST00000173968 226 ntBASIC5.86□□□□□ -1.47
LdlrP35951 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 Gm5946-201ENSMUST00000182340 970 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Gm4412-201ENSMUST00000186660 433 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Gm18407-201ENSMUST00000192126 790 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Gm18635-201ENSMUST00000199020 1060 ntBASIC5.86□□□□□ -1.47
LdlrP35951 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC5.86□□□□□ -1.47
LdlrP35951 AL603630.1-201ENSMUST00000214781 147 ntBASIC5.86□□□□□ -1.47
LdlrP35951 AC153957.1-201ENSMUST00000215235 229 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Gm7570-201ENSMUST00000215246 698 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LdlrP35951 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.86□□□□□ -1.47
LdlrP35951 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.86□□□□□ -1.47
LdlrP35951 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.86□□□□□ -1.47
LdlrP35951 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.86□□□□□ -1.47
LdlrP35951 CT571256.1-201ENSMUST00000226045 585 ntBASIC5.86□□□□□ -1.47
LdlrP35951 AC125523.1-201ENSMUST00000228018 934 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Gm6195-201ENSMUST00000063059 357 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LdlrP35951 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Gm25739-201ENSMUST00000082886 107 ntBASIC5.86□□□□□ -1.47
LdlrP35951 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LdlrP35951 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
LdlrP35951 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms