Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm26226-201ENSMUST00000082509 116 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Gm22155-201ENSMUST00000083836 162 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.5□□□□□ -1.69
Cdx1P18111 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdx1P18111 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cdx1P18111 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Cdx1P18111 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Cdx1P18111 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm25345-201ENSMUST00000104505 133 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx1P18111 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm15185-201ENSMUST00000117397 746 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm14173-201ENSMUST00000117690 278 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm8855-201ENSMUST00000118888 878 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm22210-201ENSMUST00000158101 144 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm23408-201ENSMUST00000158523 265 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm16139-201ENSMUST00000160015 420 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm3715-201ENSMUST00000172308 617 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm3650-201ENSMUST00000180600 747 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm27219-201ENSMUST00000184633 742 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm21524-201ENSMUST00000190499 696 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm21715-201ENSMUST00000191056 694 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm37609-201ENSMUST00000191778 678 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm38131-201ENSMUST00000192449 430 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Mir6906-201ENSMUST00000198998 58 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 AC140409.4-201ENSMUST00000215757 538 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm8863-201ENSMUST00000216630 926 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm9088-201ENSMUST00000220237 508 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 AC127242.4-201ENSMUST00000221242 470 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Cdx1P18111 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx1P18111 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx1P18111 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx1P18111 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx1P18111 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx1P18111 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm9521-201ENSMUST00000206656 1516 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Gm28322-201ENSMUST00000185627 1475 ntBASIC4.49□□□□□ -1.69
Cdx1P18111 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cdx1P18111 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 AC166358.5-201ENSMUST00000220706 1302 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cdx1P18111 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx1P18111 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx1P18111 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.48□□□□□ -1.69
Cdx1P18111 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cdx1P18111 Gm26067-201ENSMUST00000103789 110 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.48□□□□□ -1.69
Cdx1P18111 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cdx1P18111 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.48□□□□□ -1.69
Cdx1P18111 Gm11561-201ENSMUST00000117429 417 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms