Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.63□□□□□ -1.51
TnfP06804 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TnfP06804 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.63□□□□□ -1.51
TnfP06804 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.63□□□□□ -1.51
TnfP06804 Gm24186-201ENSMUST00000157983 127 ntBASIC5.63□□□□□ -1.51
TnfP06804 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.63□□□□□ -1.51
TnfP06804 Gm8993-201ENSMUST00000182182 983 ntBASIC5.63□□□□□ -1.51
TnfP06804 Mir7006-201ENSMUST00000183624 69 ntBASIC5.63□□□□□ -1.51
TnfP06804 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.63□□□□□ -1.51
TnfP06804 Gm45628-201ENSMUST00000210849 274 ntBASIC5.63□□□□□ -1.51
TnfP06804 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.63□□□□□ -1.51
TnfP06804 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.63□□□□□ -1.51
TnfP06804 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TnfP06804 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TnfP06804 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TnfP06804 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.63□□□□□ -1.51
TnfP06804 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TnfP06804 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
TnfP06804 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.63□□□□□ -1.51
TnfP06804 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TnfP06804 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.62□□□□□ -1.51
TnfP06804 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.62□□□□□ -1.51
TnfP06804 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.62□□□□□ -1.51
TnfP06804 Gm23692-201ENSMUST00000101881 160 ntBASIC5.62□□□□□ -1.51
TnfP06804 Mir711-201ENSMUST00000102188 82 ntBASIC5.62□□□□□ -1.51
TnfP06804 Gm24789-201ENSMUST00000104282 131 ntBASIC5.62□□□□□ -1.51
TnfP06804 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Gm11699-201ENSMUST00000119016 401 ntBASIC5.62□□□□□ -1.51
TnfP06804 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.62□□□□□ -1.51
TnfP06804 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.62□□□□□ -1.51
TnfP06804 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.62□□□□□ -1.51
TnfP06804 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.62□□□□□ -1.51
TnfP06804 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TnfP06804 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.62□□□□□ -1.51
TnfP06804 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.62□□□□□ -1.51
TnfP06804 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TnfP06804 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TnfP06804 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Smc5-206ENSMUST00000226111 3265 ntBASIC5.62□□□□□ -1.51
TnfP06804 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.62□□□□□ -1.51
TnfP06804 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TnfP06804 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TnfP06804 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.62□□□□□ -1.51
TnfP06804 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TnfP06804 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 Gm13679-201ENSMUST00000118678 484 ntBASIC5.61□□□□□ -1.51
TnfP06804 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
TnfP06804 Gm11369-201ENSMUST00000120812 318 ntBASIC5.61□□□□□ -1.51
TnfP06804 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.61□□□□□ -1.51
TnfP06804 Gm5699-201ENSMUST00000152491 723 ntBASIC5.61□□□□□ -1.51
TnfP06804 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 Mir3090-201ENSMUST00000175597 87 ntBASIC5.61□□□□□ -1.51
TnfP06804 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TnfP06804 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.61□□□□□ -1.51
TnfP06804 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.61□□□□□ -1.51
TnfP06804 Gm37631-201ENSMUST00000192275 364 ntBASIC5.61□□□□□ -1.51
TnfP06804 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.61□□□□□ -1.51
TnfP06804 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.61□□□□□ -1.51
TnfP06804 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.61□□□□□ -1.51
TnfP06804 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TnfP06804 Gm44134-202ENSMUST00000204777 545 ntBASIC5.61□□□□□ -1.51
TnfP06804 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.61□□□□□ -1.51
TnfP06804 Gm45343-201ENSMUST00000210452 828 ntBASIC5.61□□□□□ -1.51
TnfP06804 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.61□□□□□ -1.51
TnfP06804 Gm45422-201ENSMUST00000211476 246 ntBASIC5.61□□□□□ -1.51
TnfP06804 Gm18850-201ENSMUST00000211578 388 ntBASIC5.61□□□□□ -1.51
TnfP06804 Gm18601-201ENSMUST00000220831 634 ntBASIC5.61□□□□□ -1.51
TnfP06804 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.61□□□□□ -1.51
TnfP06804 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.61□□□□□ -1.51
TnfP06804 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.61□□□□□ -1.51
TnfP06804 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TnfP06804 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
TnfP06804 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TnfP06804 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TnfP06804 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.61□□□□□ -1.51
TnfP06804 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
TnfP06804 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TnfP06804 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TnfP06804 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TnfP06804 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms