Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm24186-201ENSMUST00000157983 127 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm42579-201ENSMUST00000200512 734 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm18487-201ENSMUST00000215826 878 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm14802-201ENSMUST00000121944 1885 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Mir551b-201ENSMUST00000102165 98 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Mir7081-201ENSMUST00000184490 75 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm43144-201ENSMUST00000198256 485 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm8995-202ENSMUST00000208417 3490 ntBASIC5.07□□□□□ -1.6
Col6a3E9PWQ3 Gm22750-201ENSMUST00000102076 103 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Mir690-201ENSMUST00000102110 109 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm27688-201ENSMUST00000183634 91 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm37081-201ENSMUST00000192034 196 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Snora7a-201ENSMUST00000082629 140 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Mir7022-201ENSMUST00000183749 61 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm43304-201ENSMUST00000196803 326 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm43136-201ENSMUST00000200403 636 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm9134-201ENSMUST00000193186 551 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a3E9PWQ3 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Col6a3E9PWQ3 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms