Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.86□□□□□ -1.47
Scn3aA2ASI5 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.86□□□□□ -1.47
Scn3aA2ASI5 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Gm14732-201ENSMUST00000121372 545 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Gm15227-201ENSMUST00000121844 399 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Mir6412-201ENSMUST00000184477 97 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Gm5842-201ENSMUST00000195073 622 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn3aA2ASI5 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm11486-201ENSMUST00000107322 478 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm14985-201ENSMUST00000118693 786 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm13213-201ENSMUST00000119668 474 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm17014-201ENSMUST00000120765 168 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm3531-201ENSMUST00000162698 489 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm7040-201ENSMUST00000223271 443 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm5215-201ENSMUST00000054380 405 ntBASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scn3aA2ASI5 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Scn3aA2ASI5 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm22272-201ENSMUST00000104039 134 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm25419-201ENSMUST00000104215 191 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm25293-201ENSMUST00000122792 285 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm24188-201ENSMUST00000157980 108 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm18728-201ENSMUST00000186155 753 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm43524-201ENSMUST00000197278 298 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm42459-201ENSMUST00000199679 742 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.84□□□□□ -1.48
Scn3aA2ASI5 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Desi2-202ENSMUST00000069568 1193 ntBASIC5.84□□□□□ -1.48
Scn3aA2ASI5 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Smc5-206ENSMUST00000226111 3265 ntBASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm4321-201ENSMUST00000200520 442 ntBASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm45690-201ENSMUST00000210775 246 ntBASIC5.83□□□□□ -1.48
Scn3aA2ASI5 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Scn3aA2ASI5 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms