Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Lima1Q9ERG0 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm24265-201ENSMUST00000101833 141 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm11737-201ENSMUST00000118713 468 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm15233-201ENSMUST00000118747 400 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm11313-201ENSMUST00000118779 432 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm15493-201ENSMUST00000119461 528 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm22804-201ENSMUST00000158052 101 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm16139-201ENSMUST00000160015 420 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm20545-201ENSMUST00000174739 210 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm22122-201ENSMUST00000175147 200 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm24407-201ENSMUST00000177864 141 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm38181-201ENSMUST00000181357 720 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm38011-201ENSMUST00000193312 279 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm8920-201ENSMUST00000196153 924 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm43456-201ENSMUST00000202519 457 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm44820-201ENSMUST00000207420 396 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm45485-201ENSMUST00000211229 357 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lima1Q9ERG0 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm9428-201ENSMUST00000127214 769 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm23669-201ENSMUST00000157470 128 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm27754-201ENSMUST00000183340 126 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Mir7220-201ENSMUST00000183978 60 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm38097-201ENSMUST00000192936 439 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm34768-201ENSMUST00000193884 565 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm44162-201ENSMUST00000203543 544 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm4374-201ENSMUST00000204929 424 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm19196-201ENSMUST00000209258 357 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm17999-201ENSMUST00000211568 542 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.17□□□□□ -1.58
Lima1Q9ERG0 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms