Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.06□□□□□ -1.6
Cdc40Q9DC48 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm23750-201ENSMUST00000104222 132 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm11447-201ENSMUST00000118983 858 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm22261-201ENSMUST00000158691 324 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm20397-201ENSMUST00000174520 362 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Mir7087-201ENSMUST00000184840 70 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm18247-201ENSMUST00000222937 601 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Cdc40Q9DC48 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Lipe-203ENSMUST00000105177 1251 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm14930-201ENSMUST00000118864 652 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm16200-201ENSMUST00000120385 331 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm13363-201ENSMUST00000122008 522 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm6872-201ENSMUST00000165001 700 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Mir7006-201ENSMUST00000183624 69 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm27160-201ENSMUST00000184837 199 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm27148-201ENSMUST00000185086 160 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm37719-201ENSMUST00000194615 292 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm6543-201ENSMUST00000197353 808 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm44330-201ENSMUST00000200106 143 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm18325-201ENSMUST00000203228 835 ntBASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cdc40Q9DC48 Gm45157-201ENSMUST00000208729 401 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms