Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm14563-201ENSMUST00000120571 354 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm13259-201ENSMUST00000120792 456 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm24065-201ENSMUST00000157487 264 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm24685-201ENSMUST00000157764 285 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Scarna10-201ENSMUST00000158992 325 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm6872-201ENSMUST00000165001 700 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm20519-201ENSMUST00000173684 359 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm18553-201ENSMUST00000194152 634 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm43516-201ENSMUST00000196891 322 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm18702-201ENSMUST00000196923 588 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm43215-201ENSMUST00000199108 252 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm44539-201ENSMUST00000206010 238 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm4012-201ENSMUST00000221504 581 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm9202-201ENSMUST00000223036 437 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.07□□□□□ -1.6
Chmp1b1Q99LU0 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Mir546-201ENSMUST00000102105 121 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm13679-201ENSMUST00000118678 484 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm22226-201ENSMUST00000157355 109 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm23250-201ENSMUST00000157444 267 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm23082-201ENSMUST00000157852 133 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm27855-201ENSMUST00000184122 128 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm18330-201ENSMUST00000199246 547 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Mir219c-201ENSMUST00000199860 60 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm35648-201ENSMUST00000202304 475 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm2961-201ENSMUST00000211074 772 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.06□□□□□ -1.6
Chmp1b1Q99LU0 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms