Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm5734-201ENSMUST00000189787 913 ntBASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm34149-201ENSMUST00000203547 304 ntBASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm44134-202ENSMUST00000204777 545 ntBASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.06□□□□□ -1.44
Rpap2Q8VC34 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.06□□□□□ -1.44
Rpap2Q8VC34 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.06□□□□□ -1.44
Rpap2Q8VC34 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Rpap2Q8VC34 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm26067-201ENSMUST00000103789 110 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm22592-201ENSMUST00000104242 131 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm14874-201ENSMUST00000118995 438 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm11699-201ENSMUST00000119016 401 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm23539-201ENSMUST00000157537 224 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm16139-201ENSMUST00000160015 420 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm6808-201ENSMUST00000162341 807 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm8941-201ENSMUST00000181451 899 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm38015-201ENSMUST00000193048 188 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm43444-201ENSMUST00000198123 291 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm45249-201ENSMUST00000211021 348 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm6362-201ENSMUST00000217686 836 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Rpap2Q8VC34 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Gm25422-201ENSMUST00000104219 129 ntBASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Gm12757-201ENSMUST00000119465 800 ntBASIC6.04□□□□□ -1.44
Rpap2Q8VC34 Gm12303-201ENSMUST00000119506 673 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms