Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Mir1963-201ENSMUST00000158594 59 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm27781-201ENSMUST00000185185 92 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm29596-201ENSMUST00000185710 385 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm19891-201ENSMUST00000189771 303 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm18183-201ENSMUST00000191024 615 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm43895-201ENSMUST00000203219 855 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm44690-201ENSMUST00000207984 382 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Nup88Q8CEC0 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm14512-201ENSMUST00000117924 230 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm13488-201ENSMUST00000120419 179 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm10087-201ENSMUST00000167650 330 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm19791-201ENSMUST00000180398 859 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Mir6539-201ENSMUST00000183732 110 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Mir6412-201ENSMUST00000184477 97 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm18342-201ENSMUST00000186987 694 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm29474-201ENSMUST00000187688 379 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm2427-201ENSMUST00000189121 881 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm4322-201ENSMUST00000191094 336 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm18007-201ENSMUST00000205019 844 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm14912-201ENSMUST00000120166 1773 ntBASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Nup88Q8CEC0 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Gm25758-201ENSMUST00000103987 129 ntBASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Gm22273-201ENSMUST00000104040 132 ntBASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Lipe-203ENSMUST00000105177 1251 ntBASIC6.34□□□□□ -1.39
Nup88Q8CEC0 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Gm12808-201ENSMUST00000120597 404 ntBASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.34□□□□□ -1.39
Nup88Q8CEC0 Gm24295-201ENSMUST00000158298 131 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms