Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.6□□□□□ -1.35
Vps53Q8CCB4 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm12586-201ENSMUST00000117328 1316 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm15394-201ENSMUST00000119656 1308 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm12293-201ENSMUST00000121898 590 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm23082-201ENSMUST00000157852 133 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm42961-201ENSMUST00000202023 181 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm33601-201ENSMUST00000210001 961 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm8523-201ENSMUST00000211386 552 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm18645-202ENSMUST00000212222 760 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm7768-201ENSMUST00000222988 597 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm10780-201ENSMUST00000099459 285 ntBASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps53Q8CCB4 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Vps53Q8CCB4 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.59□□□□□ -1.36
Vps53Q8CCB4 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Vps53Q8CCB4 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Vps53Q8CCB4 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Vps53Q8CCB4 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm14833-201ENSMUST00000118345 1027 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm13887-201ENSMUST00000119009 344 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm11227-201ENSMUST00000119774 471 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm13537-201ENSMUST00000120467 267 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm11804-201ENSMUST00000121663 468 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm14713-201ENSMUST00000122362 686 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm12591-201ENSMUST00000122407 1177 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm12488-201ENSMUST00000122449 499 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Mir1970-201ENSMUST00000157839 104 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm23162-201ENSMUST00000175081 121 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Mir7006-201ENSMUST00000183624 69 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm20776-201ENSMUST00000189940 700 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm29813-201ENSMUST00000195856 447 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm43491-201ENSMUST00000197133 784 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm18747-201ENSMUST00000198129 648 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm42814-201ENSMUST00000199370 460 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm44432-201ENSMUST00000203342 938 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps53Q8CCB4 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms