Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm38036-201ENSMUST00000194586 3564 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm14267-201ENSMUST00000119751 496 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm9435-201ENSMUST00000120379 877 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm5405-201ENSMUST00000120478 609 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm14710-201ENSMUST00000146082 1066 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm27754-201ENSMUST00000183340 126 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Mir6994-201ENSMUST00000198985 73 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm18007-201ENSMUST00000205019 844 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm44673-201ENSMUST00000205692 996 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm44869-201ENSMUST00000208836 357 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm9655-201ENSMUST00000211321 1284 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 AL929417.1-201ENSMUST00000214901 124 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm18541-201ENSMUST00000215935 538 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 AC158803.2-201ENSMUST00000219452 679 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 AC124420.1-201ENSMUST00000219779 791 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 AC162467.1-201ENSMUST00000220254 621 ntBASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp40Q8BWR4 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Usp40Q8BWR4 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm23839-201ENSMUST00000116957 109 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm6134-201ENSMUST00000117265 171 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm14472-201ENSMUST00000119815 282 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm12444-201ENSMUST00000121512 877 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm12322-201ENSMUST00000121605 389 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm11349-201ENSMUST00000122209 1116 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Mir7087-201ENSMUST00000184840 70 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm8498-201ENSMUST00000188227 974 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm28061-201ENSMUST00000189085 807 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm29813-201ENSMUST00000195856 447 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm42437-201ENSMUST00000197263 923 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 AL929285.1-201ENSMUST00000215522 229 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm8290-201ENSMUST00000218202 477 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm9472-201ENSMUST00000221625 526 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 AC113269.1-201ENSMUST00000227185 674 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 CT030238.4-203ENSMUST00000227343 836 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm23459-201ENSMUST00000083259 131 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Mir129-1-201ENSMUST00000083535 73 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Abcc2-202ENSMUST00000099413 1926 ntBASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Usp40Q8BWR4 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm15878-201ENSMUST00000127561 306 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm23233-201ENSMUST00000157301 137 ntBASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC7.76□□□□□ -1.17
Usp40Q8BWR4 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms