Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm25103-201ENSMUST00000122671 318 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm26153-201ENSMUST00000157433 127 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm23513-201ENSMUST00000158181 133 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm18864-201ENSMUST00000194518 1051 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm23626-201ENSMUST00000082458 133 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Snord15b-201ENSMUST00000083032 145 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm22826-201ENSMUST00000083774 165 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.15□□□□□ -1.42
Nup98Q6PFD9 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm14046-201ENSMUST00000119389 509 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm12281-201ENSMUST00000119536 298 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm12444-201ENSMUST00000121512 877 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm5699-201ENSMUST00000152491 723 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm34224-201ENSMUST00000204606 364 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Nup98Q6PFD9 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.15□□□□□ -1.43
Nup98Q6PFD9 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm24628-201ENSMUST00000122761 289 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm26310-201ENSMUST00000157766 117 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm5777-201ENSMUST00000177265 448 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm27551-201ENSMUST00000184258 77 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Vmn1r82-202ENSMUST00000191002 918 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm22220-201ENSMUST00000082671 149 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.14□□□□□ -1.43
Nup98Q6PFD9 Gm14086-201ENSMUST00000117152 173 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm15480-201ENSMUST00000120442 519 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm26312-201ENSMUST00000157769 165 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm25096-201ENSMUST00000104043 129 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm12073-201ENSMUST00000117382 524 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.13□□□□□ -1.43
Nup98Q6PFD9 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms