Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28554-202ENSMUST00000189175 484 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29213-202ENSMUST00000189703 484 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28851-202ENSMUST00000189757 484 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28461-201ENSMUST00000190023 484 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm8672-201ENSMUST00000221200 332 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Mir449a-201ENSMUST00000083641 91 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Upf3bQ3ULL6 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Smc5-206ENSMUST00000226111 3265 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm22266-201ENSMUST00000104011 138 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Mir466j-201ENSMUST00000116876 122 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm12901-201ENSMUST00000118690 532 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm11481-201ENSMUST00000120069 255 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm15803-201ENSMUST00000120118 394 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm16112-201ENSMUST00000159075 382 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm11360-201ENSMUST00000221898 262 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm25139-201ENSMUST00000083247 210 ntBASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Upf3bQ3ULL6 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm12985-201ENSMUST00000118376 183 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm13679-201ENSMUST00000118678 484 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm7189-201ENSMUST00000119811 429 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Gm14831-201ENSMUST00000120253 409 ntBASIC5.67□□□□□ -1.5
Upf3bQ3ULL6 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms