Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.32□□□□□ -1.56
Trafd1Q3UDK1 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm22194-201ENSMUST00000116869 95 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm14603-201ENSMUST00000121275 448 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm12267-201ENSMUST00000121609 761 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm24175-201ENSMUST00000158931 129 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Mir3110-201ENSMUST00000175053 80 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm27225-201ENSMUST00000183833 557 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm43516-201ENSMUST00000196891 322 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm45249-201ENSMUST00000211021 348 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm18705-201ENSMUST00000215985 913 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm6776-201ENSMUST00000057752 900 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.31□□□□□ -1.56
Trafd1Q3UDK1 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm37308-201ENSMUST00000194684 100 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm38670-201ENSMUST00000199248 77 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm44074-201ENSMUST00000204562 337 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm8039-201ENSMUST00000204758 712 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm6850-201ENSMUST00000210031 530 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trafd1Q3UDK1 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 195.4 ms