Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sox3P53784 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sox3P53784 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Gm24465-201ENSMUST00000178398 107 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.24□□□□□ -1.57
Sox3P53784 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 Gm2961-201ENSMUST00000211074 772 ntBASIC5.24□□□□□ -1.57
Sox3P53784 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Gm18247-201ENSMUST00000222937 601 ntBASIC5.24□□□□□ -1.57
Sox3P53784 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.24□□□□□ -1.57
Sox3P53784 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sox3P53784 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Sox3P53784 Gm9386-201ENSMUST00000095195 381 ntBASIC5.24□□□□□ -1.57
Sox3P53784 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Sox3P53784 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Sox3P53784 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Sox3P53784 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox3P53784 Gm24578-201ENSMUST00000103970 129 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Gm11677-201ENSMUST00000121349 977 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm15171-201ENSMUST00000122191 334 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.23□□□□□ -1.57
Sox3P53784 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.23□□□□□ -1.57
Sox3P53784 Gm16285-201ENSMUST00000162999 347 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Mir7087-201ENSMUST00000184840 70 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm29124-201ENSMUST00000186576 452 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Gm2367-201ENSMUST00000192374 472 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm37716-201ENSMUST00000193553 947 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm7181-201ENSMUST00000202197 434 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm44134-202ENSMUST00000204777 545 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.23□□□□□ -1.57
Sox3P53784 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Gm7042-201ENSMUST00000223027 384 ntBASIC5.23□□□□□ -1.57
Sox3P53784 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox3P53784 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox3P53784 Snora30-201ENSMUST00000083325 130 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Mir449a-201ENSMUST00000083641 91 ntBASIC5.23□□□□□ -1.57
Sox3P53784 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox3P53784 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.23□□□□□ -1.57
Sox3P53784 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sox3P53784 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sox3P53784 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox3P53784 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Sox3P53784 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.22□□□□□ -1.57
Sox3P53784 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox3P53784 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox3P53784 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox3P53784 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox3P53784 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sox3P53784 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sox3P53784 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms