Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Shmt1P50431 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Shmt1P50431 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Shmt1P50431 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Shmt1P50431 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Shmt1P50431 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Shmt1P50431 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm16423-201ENSMUST00000120078 947 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm7700-201ENSMUST00000120273 970 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm11797-201ENSMUST00000121336 754 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm9001-201ENSMUST00000121642 399 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm22959-201ENSMUST00000122514 303 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm15508-201ENSMUST00000160330 325 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm18343-201ENSMUST00000172802 604 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm22111-201ENSMUST00000178010 79 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm23687-201ENSMUST00000178664 79 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm24566-201ENSMUST00000179286 79 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm23305-201ENSMUST00000179342 79 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm26389-201ENSMUST00000179819 79 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm22130-201ENSMUST00000179979 79 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm22393-201ENSMUST00000180153 79 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm25085-201ENSMUST00000180298 79 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.17□□□□□ -1.42
Shmt1P50431 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.17□□□□□ -1.42
Shmt1P50431 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm19137-201ENSMUST00000213790 1164 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm8290-201ENSMUST00000218202 477 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.17□□□□□ -1.42
Shmt1P50431 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 AC123062.1-201ENSMUST00000221287 481 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm7119-201ENSMUST00000221345 695 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm6195-201ENSMUST00000063059 357 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Gm16335-201ENSMUST00000077495 309 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Shmt1P50431 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.17□□□□□ -1.42
Shmt1P50431 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Shmt1P50431 AC149294.7-201ENSMUST00000227475 1432 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Shmt1P50431 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Shmt1P50431 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Mir546-201ENSMUST00000102105 121 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm14610-201ENSMUST00000118358 966 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Gm15660-201ENSMUST00000118997 478 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm24962-201ENSMUST00000157917 109 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Gm24773-201ENSMUST00000158513 99 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Shmt1P50431 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Shmt1P50431 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm29576-201ENSMUST00000188020 678 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Gm28354-201ENSMUST00000190904 678 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Gm37727-201ENSMUST00000191637 819 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm44088-201ENSMUST00000204595 237 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC6.16□□□□□ -1.42
Shmt1P50431 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.16□□□□□ -1.42
Shmt1P50431 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC6.16□□□□□ -1.42
Shmt1P50431 LOC665443-201ENSMUST00000212284 796 ntBASIC6.16□□□□□ -1.42
Shmt1P50431 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms