Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.16□□□□□ -1.58
Cdx2P43241 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Gm20519-201ENSMUST00000173684 359 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm27551-201ENSMUST00000184258 77 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Gm37336-202ENSMUST00000193705 468 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Gm17952-201ENSMUST00000193914 747 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.16□□□□□ -1.58
Cdx2P43241 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Cdx2P43241 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Cdx2P43241 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx2P43241 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Cdx2P43241 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Cdx2P43241 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.16□□□□□ -1.58
Cdx2P43241 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.16□□□□□ -1.58
Cdx2P43241 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Cdx2P43241 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdx2P43241 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx2P43241 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdx2P43241 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx2P43241 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Cdx2P43241 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx2P43241 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdx2P43241 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx2P43241 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx2P43241 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx2P43241 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Cdx2P43241 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Cdx2P43241 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm24117-201ENSMUST00000103973 133 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 Gm11270-201ENSMUST00000117685 471 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm16254-201ENSMUST00000131528 730 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm22725-201ENSMUST00000158092 110 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx2P43241 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx2P43241 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm9238-201ENSMUST00000196181 329 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm9038-201ENSMUST00000203400 604 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 Gm18924-201ENSMUST00000211929 316 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm2099-201ENSMUST00000220979 412 ntBASIC5.15□□□□□ -1.59
Cdx2P43241 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.15□□□□□ -1.59
Cdx2P43241 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Cdx2P43241 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Cdx2P43241 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdx2P43241 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdx2P43241 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdx2P43241 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Cdx2P43241 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Cdx2P43241 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Cdx2P43241 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Cdx2P43241 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdx2P43241 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdx2P43241 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdx2P43241 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdx2P43241 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
Cdx2P43241 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdx2P43241 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Cdx2P43241 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx2P43241 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Cdx2P43241 Gm25418-201ENSMUST00000104214 129 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Cdx2P43241 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdx2P43241 Gm5834-201ENSMUST00000126680 1026 ntBASIC5.14□□□□□ -1.59
Cdx2P43241 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdx2P43241 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms