Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.38□□□□□ -1.55
HttP42859 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.38□□□□□ -1.55
HttP42859 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Gm14067-201ENSMUST00000119340 314 ntBASIC5.38□□□□□ -1.55
HttP42859 Gm5809-201ENSMUST00000121854 529 ntBASIC5.38□□□□□ -1.55
HttP42859 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Gm28471-201ENSMUST00000185994 615 ntBASIC5.38□□□□□ -1.55
HttP42859 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.38□□□□□ -1.55
HttP42859 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.38□□□□□ -1.55
HttP42859 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.38□□□□□ -1.55
HttP42859 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Gm8498-201ENSMUST00000188227 974 ntBASIC5.38□□□□□ -1.55
HttP42859 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.38□□□□□ -1.55
HttP42859 Gm44002-201ENSMUST00000205134 594 ntBASIC5.38□□□□□ -1.55
HttP42859 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.38□□□□□ -1.55
HttP42859 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.38□□□□□ -1.55
HttP42859 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HttP42859 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.38□□□□□ -1.55
HttP42859 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.38□□□□□ -1.55
HttP42859 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HttP42859 Gm37077-201ENSMUST00000195723 3691 ntBASIC5.38□□□□□ -1.55
HttP42859 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HttP42859 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
HttP42859 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Gm14750-201ENSMUST00000118262 516 ntBASIC5.37□□□□□ -1.55
HttP42859 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.37□□□□□ -1.55
HttP42859 Gm23905-201ENSMUST00000157568 109 ntBASIC5.37□□□□□ -1.55
HttP42859 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.37□□□□□ -1.55
HttP42859 Gm4526-201ENSMUST00000186039 920 ntBASIC5.37□□□□□ -1.55
HttP42859 Gm44354-201ENSMUST00000196017 143 ntBASIC5.37□□□□□ -1.55
HttP42859 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.37□□□□□ -1.55
HttP42859 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.37□□□□□ -1.55
HttP42859 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.37□□□□□ -1.55
HttP42859 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HttP42859 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.37□□□□□ -1.55
HttP42859 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
HttP42859 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.37□□□□□ -1.55
HttP42859 Mir6344-201ENSMUST00000183462 104 ntBASIC5.37□□□□□ -1.55
HttP42859 Gm27193-201ENSMUST00000184217 586 ntBASIC5.37□□□□□ -1.55
HttP42859 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.37□□□□□ -1.55
HttP42859 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.37□□□□□ -1.55
HttP42859 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Gm37084-201ENSMUST00000191688 5898 ntBASIC5.37□□□□□ -1.55
HttP42859 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.37□□□□□ -1.55
HttP42859 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HttP42859 Gm12693-201ENSMUST00000121965 483 ntBASIC5.37□□□□□ -1.55
HttP42859 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.37□□□□□ -1.55
HttP42859 Gm23391-201ENSMUST00000157579 104 ntBASIC5.37□□□□□ -1.55
HttP42859 Gm23860-201ENSMUST00000179446 132 ntBASIC5.37□□□□□ -1.55
HttP42859 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.37□□□□□ -1.55
HttP42859 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HttP42859 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC5.36□□□□□ -1.55
HttP42859 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms