Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.41□□□□□ -1.38
Traf1P39428 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Gm11804-201ENSMUST00000121663 468 ntBASIC6.41□□□□□ -1.38
Traf1P39428 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 Gm22730-201ENSMUST00000158085 171 ntBASIC6.41□□□□□ -1.38
Traf1P39428 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC6.41□□□□□ -1.38
Traf1P39428 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.41□□□□□ -1.38
Traf1P39428 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.41□□□□□ -1.38
Traf1P39428 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.41□□□□□ -1.38
Traf1P39428 Gm43724-201ENSMUST00000197516 226 ntBASIC6.41□□□□□ -1.38
Traf1P39428 Gm42428-201ENSMUST00000198677 302 ntBASIC6.41□□□□□ -1.38
Traf1P39428 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.41□□□□□ -1.38
Traf1P39428 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Traf1P39428 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.41□□□□□ -1.38
Traf1P39428 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Traf1P39428 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Traf1P39428 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Traf1P39428 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Traf1P39428 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Traf1P39428 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.41□□□□□ -1.38
Traf1P39428 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
Traf1P39428 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Traf1P39428 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Traf1P39428 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Traf1P39428 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Traf1P39428 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 Gm25758-201ENSMUST00000103987 129 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Snord65-201ENSMUST00000104269 72 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 Gm14520-201ENSMUST00000119258 387 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm11227-201ENSMUST00000119774 471 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm13537-201ENSMUST00000120467 267 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm25291-201ENSMUST00000122795 144 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.4□□□□□ -1.38
Traf1P39428 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Traf1P39428 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.4□□□□□ -1.38
Traf1P39428 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Traf1P39428 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.4□□□□□ -1.38
Traf1P39428 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.4□□□□□ -1.38
Traf1P39428 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 Gm27225-201ENSMUST00000183833 557 ntBASIC6.4□□□□□ -1.38
Traf1P39428 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.4□□□□□ -1.38
Traf1P39428 Gm29454-201ENSMUST00000190805 393 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm37490-201ENSMUST00000195566 724 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm44431-201ENSMUST00000203500 413 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.4□□□□□ -1.38
Traf1P39428 Gm45185-201ENSMUST00000207556 404 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm45157-201ENSMUST00000208729 401 ntBASIC6.4□□□□□ -1.38
Traf1P39428 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.4□□□□□ -1.38
Traf1P39428 AC132433.1-201ENSMUST00000221553 1101 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.4□□□□□ -1.38
Traf1P39428 AV026068-231ENSMUST00000225862 482 ntBASIC6.4□□□□□ -1.38
Traf1P39428 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Traf1P39428 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Traf1P39428 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Traf1P39428 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Traf1P39428 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Traf1P39428 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Traf1P39428 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Traf1P39428 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Traf1P39428 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Traf1P39428 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Traf1P39428 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Traf1P39428 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.4□□□□□ -1.39
Traf1P39428 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.4□□□□□ -1.39
Traf1P39428 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.4□□□□□ -1.39
Traf1P39428 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Traf1P39428 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.4□□□□□ -1.39
Traf1P39428 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.4□□□□□ -1.39
Traf1P39428 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.4□□□□□ -1.39
Traf1P39428 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Traf1P39428 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.39□□□□□ -1.39
Traf1P39428 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms